【导师】宋驰,现任威尼斯98488特聘教授,2005年本科毕业于武汉大学生物技术专业,2012年博士毕业于中国科学院武汉植物园,2015-2018年在澳门大学从事博士后研究。担任世界中联李时珍医药研究与应用专业委员会理事,中华中医药学会中医药信息学分会常务委员,中国中医药信息研究会中医药研究开发与咨询专业委员会委员。曾任中国中医科学院中药研究所数据中心副主任,华大基因研究院植物基因组学研究团队科研主管。多年来从事药用植物资源、基因组及生物信息学研究,共同发起“千种药用植物基因组计划”和“千种热带植物基因组计划”并建设本草基因组学学科,已成功发表丹参、菊花、黄连、地黄、红豆杉、穿心莲等SCI研究论文三十余篇,包括国际顶级学术期刊Nature Genetics(2011,2012a,2012b,2012c),Nature Biotechnology(2013),Nature Communicaiton(2014,2017,2021a,2021b)和 Molecular Plant(2015,2018),文章累计影响因子超过400。主持研究课题六项(含主持一项国家重点研发项目),获得发明专利两项,软件著作权十余项。
现主要研究方向为:药用物种基因组及资源鉴定研究,基于高通量测序技术的大数据研究。
代表性论文(影响因子为2023年最新版,IF>=5.0):
1) The Metasequoia genome and evolutionary relationship among redwoods. Plant Communications, 2023. (IF=10.5),并列第一作者
2) Genome Assembly of Polygala tenuifolia Provides Insights into Its Karyotype Evolution and Triterpenoid Saponin Biosynthesis. Horticulture Research, 2023. (IF=8.7),共同作者
3) Assembly and analysis of the mitochondrial genome of Prunella vulgaris. Frontiers in Plant Science, 2023. (IF=5.6),通讯作者
4) 1K Medicinal Plant Genome Database: An integrated database combining genomes and metabolites of medicinal plants. Horticulture Research, 2022. (IF=8.7),通讯作者
5) Herbgenomics: Decipher molecular genetics of medicinal plants. The Innovation, 2022. (IF=32.1),共同作者
6) The Cycas genome and the early evolution of seed plants. Nature Plants, 2022. (IF=18.0),共同作者
7) Taxus yunnanensis genome offers insights into gymnosperm phylogeny and taxol production. Communications Biology, 2021. (IF=5.9),第一作者
8) De novo genome assembly of the potent medicinal plant Rehmannia glutinosa using nanopore technology. Computational and Structural Biotechnology Journal, 2021. (IF=6.0),并列第一作者
9) Analysis of the Coptis chinensis genome reveals the diversification of protoberberine-type alkaloids. Nature Communication, 2021. (IF=16.6),共同作者
10) The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts. Nature Communication, 2021. (IF=16.6),共同作者
11) Genome-wide analyses reveals a glucosyltransferase involved in rutin and emodin glucoside biosynthesis in tartary buckwheat. Food Chemistry, 2020. (IF=8.8),共同作者
12) The Chrysanthemum nankingense genome provides insights into the evolution and diversification of chrysanthemum flowers and medicinal traits. Molecular Plant, 2018. (IF=27.5),第一作者
13) The medicinal plant Andrographis paniculata genome provides insight into biosynthesis of the bioactive diterpenoid neoandrographolide. The Plant Journal, 2018. (IF=7.2),并列通讯作者
14) Rapid radiations of both kiwifruit hybrid lineages and their parents shed light on a two-layer mode of species diversification. New Phytologist, 2017. (IF=9.4),并列第一作者
15) Genome assembly with in vitro proximity ligation data and whole genome triplication in lettuce. Nature Communication, 2017. (IF=16.6),共同作者
16) Analysis of the genome sequence of the medicinal plant Salvia miltiorrhiza. Molecular Plant, 2016. (IF=27.5),共同作者
17) Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nature Communication, 2014. (IF=16.6),共同作者
18) A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies. Plant Biotechnology Journal, 2014. (IF=13.8),共同作者
19) Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis. Genome Biology, 2014. (IF=12.3),共同作者
20) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 2013. (IF=46.9),第二作者
21) Maize HapMap2 identifies extant variation from a genome in flux. Nature Genetics, 2012. (IF=30.8),并列第一作者
22) Comparative population genomics of maize domestication and improvement. Nature Genetics,2012. (IF=30.8),共同作者
23) The draft genome of a diploid cotton Gossypium raimondii. Nature Genetics, 2012. (IF=30.8),共同作者
24) The genome of the mesopolyploid crop species Brassica rapa. Nature Genetics, 2011. (IF=30.8),共同作者